The algorithm performs a BLAST search with each of a set of query sequences.

The potential products are then automatically analyzed with a BLAST search against user specified databases, to check the specificity to the target intended.

Performs a BLAST search for similar sequences from selected complete eukaryotic and prokaryotic genomes.

A commonly used method is BLAST search whereby all the possible regions to which a primer may bind can be seen.

Some of the sequences found in the BLAST searches correspond to hypothetical proteins whose functions have not been experimentally verified.

Putative sequence identity was determined using BLAST searches.

The following table contains a list orthologs that were gathered from BLAST searches.

The best eukaryotic matches to these candidates from the BLAST search against nr are shown in Table 3.

A BLAST search reveals a putative receptor binding site exists between residues 75-124.

To this end, extensive BLAST searches have been performed to determine the prevalence of the proteins in various types of organisms.